Part I: Foundations¶
Part I is the tutorial half of this site. Four chapters build the vocabulary and the measurement tools that the research manuscripts in Parts II–V take for granted: where fractal geometry came from, how dimension is defined and estimated, what fractals look like in one to four dimensions, and a glossary of the terms and equations used throughout.
The Four Chapters¶
| Chapter | Page | What it covers |
|---|---|---|
| 1 | History of Fractal Mathematics | From Cantor to Mandelbrot to modern complex dimensions; self-similarity versus self-affinity; fractals enter biology; an appendix of machine-checked proofs |
| 2 | Mathematical Foundations of Fractals | Hausdorff dimension, box-counting and differential box-counting, power laws, the Hurst exponent and lacunarity |
| 3 | Fractal Dimensionality (1D through 4D) | 1D through 4D fractals with examples: 1/f noise, Brownian surfaces, Mandelbrot and Julia sets, the Menger sponge, DLA, branching networks and spacetime |
| 4 | Glossary and Equations | Quick reference for terms and formulas, including the Barnsley fern IFS maps and the ten key equations |
Recommended Reading Order¶
- Chapter 1 first if you are new to fractals: it motivates every later definition historically and ends with the self-similar/self-affine distinction that organises the whole project.
- Chapter 2 next, for the measurement tools (box-counting, differential box-counting, the Hurst exponent) that the Part II methods apply to leaves, branches and forest canopies.
- Chapter 3 can be read selectively by dimension: §3.1 for signals and time series, §3.2 for images and terrain, §3.3 for branching networks and DLA, §3.4 for growth dynamics.
- Chapter 4 is a reference rather than a read-through; return to it whenever a symbol or term is unfamiliar.
Readers who come for the biology can start at Chapter 1 §1.5 and continue straight to Part II: Metabolic Scaling Theory.
Companion Notebooks¶
-
Run the chapters as code
Each chapter has a Jupyter notebook that reproduces its figures and computations. The notebooks are rendered as pages with their stored outputs; the source
.ipynbfiles live underdocs/notebooks/foundations/in the repository.- Chapter 1 notebook — History of fractals
- Chapter 2 notebook — Mathematical foundations
- Chapter 3 notebook — Fractal dimensionality
- Zeta space notebook — Riemann zeta visualisations that bridge §1.6 of Chapter 1 and Part III
Where to Go Next¶
- Look up a term or formula in the Glossary and Equations.
- Browse the machine-readable knowledge bundles: the concept ontology and the verified proofs cited from Chapter 1.
- Continue to the research manuscripts, starting with Part II: Metabolic Scaling Theory.