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Cyberinfrastructure

Federated Kubernetes (K8s)

Pacific Research Platform (PRP) - s a multi-institutional extensible deployment that establishes a science-driven high-capacity data-centric ‘freeway system.’

National Data Service (NDS) Labs - is an experimental space for evaluating, developing, and exploring interoperability between research data management services.

2i2c - designs, develops, and operates JupyterHubs in the cloud for communities of practice in research & education.

Cloud Workbenches

CyberGIS - HPC and Cloud service for geospatial data anlayses

CyVerse Discovery Environment - multi-platform service for full-stack cloud data management

DesignSafe CI - workbench for natural hazards research.

DNA Nexus - is an American company that provides a cloud-based data analysis and management platform for DNA sequence data.

Galaxy - is a scientific workflow, data integration,[3][4] and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming or systems administration experience.

Google Earth Engine (GEE) - planetary-scale platform for Earth science data & analysis.

HydroShare - platform for hydrological science applications supported by CUAHSI

KBase - the Department of Energy Systems Biology Knowledgebase (KBase) is a software and data science platform designed to meet the grand challenge of systems biology: predicting and designing biological function.

Microsoft Planetary Computer - Microsoft Azure compute environment (JupyterHub) with PANGEO software.

OSF.io - is a free, open source web application that connects and supports the research workflow, enabling scientists to increase the efficiency and effectiveness of their research.

RStudio - is an integrated development environment for R, a programming language for statistical computing and graphics. It is available in two formats: RStudio Desktop is a regular desktop application while RStudio Server runs on a remote server and allows accessing RStudio using a web browser.

High Throughput Computing

OSG - of research collaborations, campuses, national laboratories, and software providers is dedicated to the advancement of all open science via the practice of distributed High Throughput Computing (dHTC), and to the advancement of its state of the art.

Data Transfer Services

Globus - is a non-profit service for secure, reliable research data management.

On-Demand Virtual Machines

Colab - Google's CoLaboratory starts a Jupyter Notebook, limited in size but can be increased with subscription.

CodeSpaces - GitHub's CodeSpaces starts a VS Code instance from a GitHub Repository which can be variabily sized (requires subscription)

GitPod - starts a VS Code instance that can be variably sized

MyBinder.org - starts a defined environment (RStudio, Jupyter, VS Code) from a GitHub Repository, limited in size.

Frameworks

PanGeo

Research Platforms

ICICLE


Last update: 2023-11-10